Run protein folding on AWS with Quantori
HPC Blog
Quantori has developed a solution for running protein folding analyses on AWS, offering an easy-to-use interface for biopharmaceutical scientists to predict protein structures using machine learning models.
- Features a user-friendly interface for protein structure prediction
- Allows users to upload protein sequences or FASTA files
- Supports multiple machine learning algorithms like AlphaFold2
- Uses AWS Batch and EC2 for computational processing
- Provides visualization of protein structures and confidence metrics
The solution's architecture uses separate VPCs for frontend and backend, with AWS services like Amazon ECR, FSx for Lustre, and AWS Batch. Benchmarking shows performance varies by instance type, with m7g.4xlarge and g4dn.xlarge offering optimal price-performance for specific workflows.
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