AWS HealthOmics provides a seamless way to orchestrate AFNI fMRI data preprocessing pipelines on AWS without managing compute and storage infrastructure.

<div>
<p>This article provides a walkthrough for preprocessing functional Magnetic Resonance Imaging (fMRI) data on AWS using the Analysis of Functional NeuroImages (AFNI) tool and the AWS HealthOmics service.</p>
<p>Specifically, the article covers:</p>
<ul>
<li>Overview of the solution using AWS HealthOmics, Nextflow, and Amazon S3</li>
<li>Prerequisites for the walkthrough</li>
<li>Creating a HealthOmics workflow and run using the AWS CLI and Nextflow</li>
<li>Running the workflow to process fMRI data using AFNI</li>
<li>Viewing the processed fMRI data output in an Amazon S3 bucket</li>
<li>Conclusion on using AWS HealthOmics for fMRI data preprocessing</li>
</ul>
</div>


fMRI Data Preprocessing on AWS using AFNI and AWS HealthOmics

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