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Leveraging Seqera Platform on AWS Batch for machine learning workflows – Part 2 of 2

HPC Blog



This blog post is a step-by-step guide on how to leverage Seqera Platform and AWS Batch for executing machine learning workflows, as a follow-up to Part 1 which introduced Nextflow and Seqera Platform.

Specifically, the article covers:

  • Prerequisites: AWS account, IAM understanding, Seqera Cloud account
  • Creating an Amazon S3 bucket for data storage
  • Setting up IAM policies and roles for Seqera access
  • Creating a Seqera Cloud account and workspace
  • Setting up an AWS Batch Compute Environment in Seqera
  • Adding an ML pipeline to Seqera Launchpad
  • Running the ML pipeline on AWS Batch using Seqera
  • Conclusion on benefits of Seqera Platform + AWS for data analysis and ML


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